sydney-thomas Goto Github PK
Name: Sydney Thomas
Type: User
Company: Ometa Labs
Name: Sydney Thomas
Type: User
Company: Ometa Labs
Data and code used in the publication "Antibiotic administration during birth effects bile acid metabolism"
Takes MZmine output and collapses features that are in the same ion identity molecular network (iimn), filters and rclr normalizes data. Also cleans library annotations from GNPS or sirius to match the collapsed feature table.
Using MASST or fastMASST, adding metadata onto a tree ontology for microbes
Data and code used in the publication "Multi-omic analysis of human milk reveals negative regulation between human milk oligosaccharides and milk bacteria"
Merges and correlates multiomics data and creates visualizations with significantly correlated features.
MZmine 3 source code repository
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