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View Code? Open in Web Editor NEWR pkg for analysis, visualization, and interpretation of community composition data
License: Other
R pkg for analysis, visualization, and interpretation of community composition data
License: Other
Hi there. Was curious about using this package but encountered some errors. It seems that formatting of the phyloseq files between your example data, and my own are not the same:
It looks like at the OTU_Table level our samples and reference names are swapped which then results in this error:
p.prev <- prev(RAB_fungi, taxon="Order", n_taxa=5)
Error in data.frame(tax = phyloseq::taxa_names(PS), abundance = phyloseq::taxa_sums(PS), :
arguments imply differing number of rows: 2502, 102
Any suggestions?
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