Suresh Kumar M's Projects
learning with github
An analysis and visualization platform for 'omics data
a platform to share bioinformatics talks, tutorials and trainings.
Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation
:memo: An awesome Data Science repository to learn and apply for real world problems.
A collection of various awesome lists for hackers, pentesters and security researchers
A curated list of awesome R packages, frameworks and software.
Collection of scripts for bacterial genomics
bg7 website
This repo is dedicated to make bioinformatics resources available for anyone who wish to enter this field. (You may find it useful or not useful based on your level). I am still embarking my path in the field, just posting things based on my knowledge and the things which worked for me personally, they may/may not work with you, totally fine.
Essential Cheat Sheets for deep learning and machine learning researchers
Bioinformatics containers
Software that can generate photos from paintings, turn horses into zebras, perform style transfer, and more.
Data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe, Keras), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines.
projects using galaxy, python, linux command line to analyze sequencing data
Benchmark datasets for WGS analysis
Code and data for paper "Deep Photo Style Transfer": https://arxiv.org/abs/1703.07511
all methods related to Enterobase
genome scale metabolic model reconstruction
The Rockefeller List of Genetic Analysis Software on github
GenomeTools userscripts.
beginner in s.aureus genomics
r tutorials
Python utility libraries on genome assembly, annotation and comparative genomics
Oxford Deep NLP 2017 course
A repository with scripts to run pipeline that are commonly used in the Meren Lab
Multilocus sequence typing by blast using the schemes from PubMLST