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Sunhwan Jo's Projects

antibiotic icon antibiotic

Reproducing results from "A Deep Learning Approach to Antibiotic Discovery"

ase_ani icon ase_ani

ANI-1 neural net potential with python interface (ASE)

cddd icon cddd

Implementation of the Paper "Learning Continuous and Data-Driven Molecular Descriptors by Translating Equivalent Chemical Representations" by Robin Winter, Floriane Montanari, Frank Noe and Djork-Arne Clevert.

charmmdoc icon charmmdoc

Unofficial CHARMM Documentation based on c38b1

chemtreemap icon chemtreemap

An Interactive Map of Biochemical Similarity in Molecular Datasets. The document: http://chemtreemap.readthedocs.org/en/latest/ . The project website:

chemts icon chemts

Molecule Design using Monte Carlo Tree Search with Neural Rollout

csa icon csa

Python implementation of conformational space annealing

deep_learning icon deep_learning

Deep Learning Resources and Tutorials using Keras and Lasagne

fastai icon fastai

The fastai deep learning library

fastcore icon fastcore

Python supercharged for the fastai library

fpocket icon fpocket

fpocket is a very fast open source protein pocket detection algorithm based on Voronoi tessellation. The platform is suited for the scientific community willing to develop new scoring functions and extract pocket descriptors on a large scale level. fpocket is distributed as free open source software. If you are interested in integrating fpocket in an industrial setting and require official support, please contact Discngine (www.discngine.com).

ftdock icon ftdock

Rigid-body protein-DNA sampling

galaxy icon galaxy

Data intensive science for everyone.

griddata icon griddata

Python package for reading and writing various grid data formats

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