Giter Club home page Giter Club logo

Comments (8)

mhangaard avatar mhangaard commented on June 18, 2024 1

This is the original source of Magpie: https://bitbucket.org/wolverton/magpie

from catlearn.

WardLT avatar WardLT commented on June 18, 2024 1

I do not currently have plans to put Magpie on conda. However, I have re-implemented the Voronoi fingerprints and most other descriptors in matminer. There is an example for the Voronoi specifically: notebook

Will that work?

from catlearn.

mhangaard avatar mhangaard commented on June 18, 2024

Hi Jan, thank you for taking care of the package in conda-forge.
I agree, this is an issue that must be fixed. magpie should be treated properly as an external dependency.
This is where it is imported: https://github.com/SUNCAT-Center/CatLearn/blob/master/catlearn/fingerprint/voro.py

from catlearn.

jan-janssen avatar jan-janssen commented on June 18, 2024

@WardLT Can you help us? Are there any plans to add magpie to anaconda? Or is it more reasonable to extract the voronoi fingerprint and implement it directly in Python using voro++ bindings?

from catlearn.

mhangaard avatar mhangaard commented on June 18, 2024

There is even a Python wrapper for magpie by Wolverton group: https://bitbucket.org/wolverton/magpie-python

from catlearn.

WardLT avatar WardLT commented on June 18, 2024

How does catlearn's Magpie interaction work? Does it use the REST API for Magpie or the text interface?

from catlearn.

jan-janssen avatar jan-janssen commented on June 18, 2024

Using the text interface
https://github.com/SUNCAT-Center/CatLearn/blob/master/catlearn/fingerprint/voro.py#L31

from catlearn.

WardLT avatar WardLT commented on June 18, 2024

Maybe a good short-term fix would be to download the Magpie JAR file on demand. I have put it up on Bitbucket: https://bitbucket.org/wolverton/magpie/downloads/Magpie.jar

from catlearn.

Related Issues (20)

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.