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ardiss

Automatic Relevance Determination for Imputation of Summary Statistics

baidupcs-go

百度网盘客户端 - Go语言编写

bullshitgenerator

Needs to generate some texts to test if my GUI rendering codes good or not. so I made this.

ccgwas

deeppheno

dist

direct imputation of summary statistics for unmeasured SNPs

drugtargetor

Backbone of Drug Targetor: a js web app for GWAS-based drug-target networks

epigraphdb-pqtl

This is the github repository to provide the R scripts been used in the phenome-wide Mendelian randomization study of plasma proteome.

fdr_regression_psychiatric

fdrreg

False discovery rate regression

fgwas

Functional genomics and genome-wide association studies

gemma

Genome-wide Efficient Mixed Model Association

genetics

Issue tracker for Open Targets Genetics

genetics-colocalisation

Colocalisation pipeline for Open Targets Genetics

gwas-power

R Functions to calculate power of GWAS studies for a single associated SNP, under various parameters. Suitable for classical (i.e. single-SNP single-trait) GWAS studies using linear regression models, i.e for quantitative traits.

gwas-pw

Pariwise analysis of GWAS

gwas-scrnaseq-integration

A Shiny tool to define the cell-type of action by integrating single cell expression data with GWAS

hdl

High-definition likelihood inference of genetic correlations (HDL)

ldsc

LD Score Regression (LDSC)

magma_celltyping

Identify cell types underlying the associations found in GWAS summary statistics

metaxcan

MetaXcan software and manuscript

mixer

Causal Mixture Model for GWAS summary statistics

mr_psy_covid19

mtag

Python command line tool for Multi-Trait Analysis of GWAS (MTAG)

paintor_v3.0

Fast, integrative fine mapping with functional data

postgap

Linking GWAS studies to genes through cis-regulatory datasets

predixcan

PrediXcan Project

rss

Regression with Summary Statistics.

saige

sddx

Infer the GWAS summary statistics for differential diagnoses based on summary statistics of corresponding traits