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kallisto-tcga-isbcgc

kallisto-wdl

This describes running Kallisto on the FireCloud

kallisto-wdl-tcga

This repo contains FireCloud TSVs and WDL for running fastq.tar.gz in FireCloud TCGA buckets.

kraken

Kraken taxonomic sequence classification system

krona

mavis

Merging, Annotation, Validation, and Illustration of Structural variants

metadata-directory

Prototype metadata directory for the Research Data Alliance:

metagenomicantibioticresistance

A Simple Method for Extracting Antimicrobial Resistance Information from Metagenomes

metaphlan-isbcgc

metaphlan-isbcgc-dockstore

metaphlan-sbcgc

A description of Metaphlan workflow on the Seven Bridges CGC platform

metaphlan-wdl

This is a repository for Workflow Description Language (WDL) files, which are used to run analysis on the FireCloud.

minimal

Minimal is a Jekyll theme for GitHub Pages

minimo

Minimo - Minimalist theme for Hugo

mmtf-docker

A Docker Image containing Macromolecular Transmission Format (MMTF)

mmtf-genomics

Methods for mapping genomic data onto 3D protein structure.

mmtf-hackathon-2018

Hackathon projects repository for MMTF Workshop 2018

mmtf-proteomics

Project under construction: Methods for mapping proteomics data on 3D protein structure.

mmtf-pyspark

Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.

mmtf-workshop-2018

Structural Bioinformatics Training Workshop & Hackathon 2018

mothur

multi-annotator

Multi Tool Variant Annotator

nanoporemapper

A simple command line tool to map nanopore reads with high accuracy

nlmreproducibility

nlmreproducibilityworkshop

odsetdocker

odsetdocker2

pgap

NCBI Prokaryotic Genome Annotation Pipeline

phenvar

phlan