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ahead_morphometry

emc

Development of package Enhanced Models of Choice

emcadapt

Fast implementation of learning rules for EMC

exptools2

Version 2 of exptools (by KnapenLab)

ez

EZ diffusion model practical

firdeconvolution

Python class that performs finite impulse response fitting on time series data.

flashtask

fmri_protocol_comparison_se_me

Notebooks & other code used for a Multi-Echo fMRI project

fmriprep

This is an custom version of fmriprep v1.2.6, customized to change the multi-echo pipeline to output/preprocess all echos individually (instead of combining them, as was the default in v1.2.6)

histochemical_mri_stn

imcn-learningtask

Reinforcement learning task as used in the IMCN

imcn-stoptask

Stop task implemented in PsychoPy

interpretationrldev

lca

Code to simulate the Leaky, Competing Accumulator model in R

osfclient

A python library and command-line client for file storage on OSF

prop_drift_model

Proportional drift diffusion model, aka Palmer-fit

psychojs

PsychoJS is the online counterpart of the PsychoPy Python library.

pystain

rlddm

rldmc

rlemc2

Some scripts for fitting RL-EAMs within EMC2

script.xbmc.lcdproc

LCDproc Python addon for XBMC, possibly replacing LCD support from core. Original & initial code by Memphiz (https://github.com/Memphiz - thanks for your permission to use!), improvements and finalisations by me.

stnrep

summerschool2023

Materials for model-based neuroscience summer school 2023

summerschool_mbn_2018

Materials for the 2018 Summer School of the IMCN research unit at the University of Amsterdam

summerschool_mbn_2019

Code for model-based neuroscience workshop 2019

summerschool_mbn_2022

Code for model-based fMRI tutorial in the Amsterdam model-based neuroscience summer school

tedana

TE-dependent analysis of multi-echo fMRI

tls