Comments (1)
some code is added to for this support but additional testing is needed.
from aaftf.
Related Issues (20)
- Support single-end and interleaved fastq data HOT 3
- Generate command list as top-level running HOT 1
- use bbduk.sh (BBMap) for filter step instead of bwa/bowtie matching reads HOT 6
- Specify version numbers of all sub-tools
- Integrate NCBI tax tool in screening HOT 2
- Add GC% in 'assess' command HOT 1
- After to setup of the requirements, how to install? Is it necessary a sudo user? HOT 4
- Out of Memory on default pilon run HOT 1
- Add racon as polishing step
- sourmash LCA database update url? HOT 18
- AAFTF pipeline always fails at vecscreen step HOT 2
- [Enhancement] Assembly for Nanopore reads HOT 2
- error when running AAFTF filter and AAFTF vecscreen HOT 5
- Do vecscreen and sourpurge have similar functions? HOT 6
- masurca polca.sh breaks with recent samtools HOT 1
- AAFTF pipeline exiting when mito fails HOT 3
- spades assembly failed HOT 4
- aaftf filter URL issue HOT 2
- AAFTF filter urllib issue
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from aaftf.