Comments (1)
This is solved in the updated workflow. The problem here is that the filtered file is being written over the input fastq file (very bad practice that should not have been in the workflow) and windows is stopping you from doing that.
In the updated workflow, filtered files are written to their own directory.
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Related Issues (20)
- Is "http://www.mothur.org" currently down? HOT 5
- Problem with phangorn package in the revised workflow HOT 7
- creating and plotting graphs from Workflow for Microbiome data HOT 7
- creating a legend for the graph under creating and plotting graphs HOT 6
- Component sample names do not match. Try sample_names(). HOT 4
- Effects of prevalence filtering on downstream analysis HOT 2
- Prevalence filtering issue HOT 1
- question about the abundant unidentified ASVs HOT 2
- Quality control of code HOT 6
- NMDS plot for 16s amplicon HOT 5
- Scale bar for tree using phangorn and phyloseq HOT 2
- Error learn question HOT 2
- Issue in Creating Phylogenetic tree HOT 9
- Error in R code HOT 1
- Error in constructing a neighbor-joining tree HOT 1
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