Comments (16)
0xaf1f
commented on June 27, 2024
Well, so there's already https://github.com/son-of-gridengine/sge/blob/master/source/README.BUILD#building-debian-or-red-hat-packages-a-id-packages-a. Are you looking for any expansion to those sections?
Currently, the source doesn't build with Java 9. See https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=875404. Not sure if we should file new bugs or if there's a way to import things from Dave's site.
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0xaf1f
commented on June 27, 2024
And I see now that there's also https://github.com/son-of-gridengine/sge/blob/master/source/README.packages
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danpovey
commented on June 27, 2024
Its good that it has *some* kind of documentation. I guess that documents
something towards the end of the process.
When I previously tried to build it from the Debian sources, I found it was
highly nontrivial.
I guess I was thinking of more specific documentation that would allow you
to build it starting from a specific Debian base version, and which would
include installing necessary dependencies.
If at some point you decide to take on building it, it would be great if
you could keep track of what you did, even if it's just a sequence of
command lines. Maybe we can build that into a more detailed set of
instructions.
…On Mon, May 14, 2018 at 12:36 AM, Afif Elghraoui ***@***.***> wrote:
And I see now that there's also https://github.com/son-of-
gridengine/sge/blob/master/source/README.packages
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0xaf1f
commented on June 27, 2024
That gets into just the general procedure of building packages. I personally use sbuild to build in a chroot, which can be set for any particular Debian version. sbuild takes care of installing all the build-dependencies and running the whole build process. But there are other tools to do basically the same thing. The documentation in this repository describes the build process on the system in use.
Also, the Debian package source included here is different from what we distribute in Debian. the latter reorganize files according to the FHS and so don't install anything into /opt.
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danpovey
commented on June 27, 2024
Oh-- do you have anything you can point to that documents how you build for
Debian, i.e. what differs from this repo?
…On Mon, May 14, 2018 at 1:03 AM, Afif Elghraoui ***@***.***> wrote:
That gets into just the general procedure of building packages. I
personally use sbuild <https://wiki.debian.org/sbuild> to build in a
chroot, which can be set for any particular Debian version. sbuild takes
care of installing all the build-dependencies and running the whole build
process. But there are other tools to do basically the same thing. The
documentation in this repository describes the build process on the current
system.
Also, the Debian package source included here is different from what we
distribute in Debian. the latter reorganize files according to the FHS and
so don't install anything into /opt.
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entn-at
commented on June 27, 2024
There's another git repository of SGE from which the Debian packages seem to be built: https://salsa.debian.org/hpc-team/gridengine
There appear to be a number of patches (under debian/patches) from only a few months ago to make it compatible with newer versions of glibc & openssl. However, it also seems to be broken (git fsck errors).
(Note: I just saw this effort; lately, I've been having issues with SGE on Ubuntu, tried to build it from source myself, and failed.)
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danpovey
commented on June 27, 2024
What SGE issues did you have?
If it was a failure of QLOGIN sessions after scheduling, I may have a fix
for that.
…On Mon, May 14, 2018 at 1:10 AM, Ewald Enzinger ***@***.***> wrote:
There's another git repository of SGE from which the Debian packages seem
to be built: https://salsa.debian.org/hpc-team/gridengine
There appear to be a number of patches (under debian/patches) from only a
few months ago to make it compatible with newer versions of glibc &
openssl. However, it also seems to be broken (git fsck errors).
(Note: I just saw this effort; lately, I've been having issues with SGE on
Ubuntu, tried to build it from source myself, and failed.)
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danpovey
commented on June 27, 2024
Oh, and I think I'm realizing what happened, now.
The repo of Dave Love's that I cloned must have been out of date, its
releases only went to 8.1.1, not to 8.1.9. There must be another more up
to date source somewhere else.
Either the one you mentioned (which Afif seems to maintain), or the source
that they got their upstream from.
…On Mon, May 14, 2018 at 1:14 AM, Daniel Povey ***@***.***> wrote:
What SGE issues did you have?
If it was a failure of QLOGIN sessions after scheduling, I may have a fix
for that.
On Mon, May 14, 2018 at 1:10 AM, Ewald Enzinger ***@***.***>
wrote:
> There's another git repository of SGE from which the Debian packages seem
> to be built: https://salsa.debian.org/hpc-team/gridengine
>
> There appear to be a number of patches (under debian/patches) from only
> a few months ago to make it compatible with newer versions of glibc &
> openssl. However, it also seems to be broken (git fsck errors).
>
> (Note: I just saw this effort; lately, I've been having issues with SGE
> on Ubuntu, tried to build it from source myself, and failed.)
>
> —
> You are receiving this because you authored the thread.
> Reply to this email directly, view it on GitHub
> <#3 (comment)>,
> or mute the thread
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> .
>
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0xaf1f
commented on June 27, 2024
@danpovey The sbuild link I listed before explains how to set it up and use it. Here it is again in literal form: https://wiki.debian.org/sbuild
There's another git repository of SGE from which the Debian packages seem to be built: https://salsa.debian.org/hpc-team/gridengine
This is the source for the official Debian packages.
There appear to be a number of patches (under debian/patches) from only a few months ago to make it compatible with newer versions of glibc & openssl. However, it also seems to be broken (git fsck errors).
Those should be applied already. For example, the ssl patches are included here f75d727 (although mistakenly attributed to me; they were actually the work of Mark Hymers).
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0xaf1f
commented on June 27, 2024
8.1.9 looks to correspond to 7222ec8
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danpovey
commented on June 27, 2024
Oh. It's strange that they didn't show up on his tag list-- it's almost as
if they were deleted later on. And I didn't realize that tags corresponded
to commit-ids, I thought they just pointed to commit-ids. (maybe this is
due to it being imported from some other version control system?)
If you can figure out what commits they are supposed to point to you can
re-create them.
In the case of 8.1.9, I imagine it should actually point to the parent
commit of that 'tag commit', e.g. to
9c62efc.
…On Mon, May 14, 2018 at 1:23 AM, Afif Elghraoui ***@***.***> wrote:
8.1.9 looks to correspond to 7222ec8
<7222ec8>
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danpovey
commented on June 27, 2024
I suspect what he did is something like
git commit --allow-empty -m "TAG 819"
instead of creating an actual tag like
git tag 819 HEAD
…On Mon, May 14, 2018 at 1:31 AM, Daniel Povey ***@***.***> wrote:
Oh. It's strange that they didn't show up on his tag list-- it's almost
as if they were deleted later on. And I didn't realize that tags
corresponded to commit-ids, I thought they just pointed to commit-ids.
(maybe this is due to it being imported from some other version control
system?)
If you can figure out what commits they are supposed to point to you can
re-create them.
In the case of 8.1.9, I imagine it should actually point to the parent
commit of that 'tag commit', e.g. to
9c62efc.
On Mon, May 14, 2018 at 1:23 AM, Afif Elghraoui ***@***.***>
wrote:
> 8.1.9 looks to correspond to 7222ec8
> <7222ec8>
>
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0xaf1f
commented on June 27, 2024
I think Dave was primarily using darcs and used an auto-git importer.
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entn-at
commented on June 27, 2024
@danpovey My problem was much simpler than that. sge_qmaster kept segfaulting after a few seconds. This seems to be a known problem (I found reports dating back to 2012), but I did not find a solution. I tried to build from source and debug the issue, but after struggling too much with the build process I gave up. In the end, I solved it by installing the latest Debian packages, as the ones in Ubuntu are broken (see Launchpad bug: https://bugs.launchpad.net/ubuntu/+source/gridengine/+bug/1633251).
I didn't mean to detract from the Debian package build process issue.
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Kunzol
commented on June 27, 2024
Please look at the patches I sent via darcs to the ticket system.
I guess some of them already solve the problem you have.
Especially number 1619.
And please do not mix several issues into one !!!
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Kunzol
commented on June 27, 2024
Back to the topic ...
I found the list of dependencies for building the Debian package.
Actually I created a Debian package with all the dependencies, last time I built packages for Jessie and Stretch.
Off Topic: please do not miss my last comment on Issue #1 (I mention this because it is already closed).
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