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Yale73 avatar Yale73 commented on September 16, 2024

I found it is because I choose the wrong obs. I fixed it.
But after I corrected it, I got new error. AttributeError: 'Namespace' object has no attribute 'device'.

Thanks for your patience.
Yale

from mars.

giandrickdabian avatar giandrickdabian commented on September 16, 2024

Hi, how did you solve this issue? I am currently experiencing it now.

from mars.

Yale73 avatar Yale73 commented on September 16, 2024

@giandrickdabian I gave it up and used singleR package to annotate the cell types.

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mbrbic avatar mbrbic commented on September 16, 2024

@giandrickdabian You can check whether the labels you are giving to the MARS are correct. If you have string labels, you need to convert them to numeric. You can check how this is done for Tabula Muris data here.

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giandrick avatar giandrick commented on September 16, 2024

@giandrickdabian You can check whether the labels you are giving to the MARS are correct. If you have string labels, you need to convert them to numeric. You can check how this is done for Tabula Muris data here.

Hey thanks, yes in my notebook you see that i did change them to numeric. I read somewhere something about setting reprocess input to true but idk where exactly to do that

from mars.

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