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Slookeur avatar Slookeur commented on June 29, 2024

Hello,
first of all I have no issues opening your file, and the size of the file is unlikely to be a problem.
So some information is missing to understand what is going on: what are you doing exactly and
what box size are you using ?
Also the coordinates in your file are Cartesian, just to avoid any issue with that.

I am currently working on the LAMMPS side of things, so to write, because you are absolutely correct:
LAMMPS is quite popular these days ... not sure when or if I will have the opportunity to look into what you are mentioning ...
However and that is the good news for you atomes is an open source software, and your absolutely
welcome to participate and work on this features (or anybody else interested in), note that I will do
my best to help you out if you decide to step in ;-)

Best regards.

S.

from atomes.

sailangyf avatar sailangyf commented on June 29, 2024

Hello Dr. Sébastien Le Roux,
Thanks a lot, I realized the problem is when I edited the box and periodicity, I entered edge values into angle part and angle values into edge part. That's a really stupid mistake. Maybe I should not work today. :-( Sorry for that!
Meanwhile, regarding the part of adding feature of reading LAMMPS Dump File or give more support to LAMMPS pre/post-processing, I think it's really meaningful and sometimes necessary. I am interested in contributing to it if possible after I finish my current project and have more spare time. But first I need to improve my programming capability then. :-|
Thank you again for you efforts to develop an excellent software, especially important for analysing amorphous material.
Best regards,
Fan

from atomes.

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