Wei Shen's Projects
Awesome resources on Bioinformatics, data science, machine learning, programming language (Python, Golang, R, Perl) and miscellaneous stuff.
A curated list of awesome Bioinformatics libraries and software.
An alternative of standard library bytes.Buffer
some benchmarks
Bioinformatics scripts
A lightweight and high-performance bioinformatics package in Golang
Practical, reusable scripts for bioinformatics
Conda recipes for the bioconda channel.
Benchmarking programming languages/implementations for common tasks in Bioinformatics
Tools for bioinformatics
Bioinformatics Perl modules
网传附莆田系医院名单,欢迎更新
A nextflow-based BLAST command-line helper tool
Face-meltingly fast, thread-safe, marshalable, unionable, probability- and optimal-size-calculating Bloom filter in go
Buffer/Byte pool for Go
breader (Buffered File Reader), asynchronous parsing and pre-processing while reading file. Safe cancellation is also supported.
A practical cross-platform command-line tool for safely batch renaming files/directories via regular expression
Removing control/background mutations from breseq output index.html
Burrows-Wheeler Transform and FM-index in golang
assembly, binning, profiling pipelines for CAMI2
Monitoring system clipboard change and joining multi-line text. It's very useful when copying multi-line text from PDF files.
cluster files into multiple directories by creating symbolic links or moving files
A platform independent command line note app
conda recipes for my tools
An implementation of Count-Min Sketch in Golang
Run workflow mixed with concurrent and sequential jobs. Please use https://github.com/shenwei356/rush
A cross-platform, efficient and practical CSV/TSV toolkit in Golang
CSV/TSV file manipulation and more. Please use my another tool: csvtk, https://github.com/shenwei356/csvtk
Summarize sizes of directories and files in directories