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adamian avatar adamian commented on August 24, 2024

That might be difficult to trace, I've done an ack-grep in all files of GPmat and "indexAll" only appears in that line...
If I understand correctly, fgplvmOptimiseSequence is similar to fgplvmOptimisePoint but the points are correlated. In that context, indexAll might (?) denote which indexes of X form one (or more?) sequence(s).
Sorry I haven't been able to help more, but it seems to me it has to do with indexing elements of X (e.g. 1:size(model.X,1) for the whole set treated as sequence).

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TuBui avatar TuBui commented on August 24, 2024

Thank you. I try fgplvmOptimisePoint as suggested and the error is gone.

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nghorbani avatar nghorbani commented on August 24, 2024

Do you think a fix for this in the main repo is appropriate?

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adamian avatar adamian commented on August 24, 2024

Yes, I added it, thanks. But bear in mind that fgplvmOptimisePoint won't take sequential correlations into account, so the behaviour is not 100% the same.

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