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  • šŸ‘‹ Hi, Iā€™m @shannjiang
  • šŸ‘€ Iā€™m interested in math, computer science, coding, swimming, travelling, drawing, painting, playing piano and ukulele
  • šŸŒ± Iā€™m currently learning machine/deep learning, playing ukulele, Spanish and Japanese
  • šŸ’žļø Iā€™m looking to collaborate on bioinformatics and computational biology focused on neurodegenerative diseases and psychiatric diseases
  • šŸ“« How to reach me [email protected]

shannjiang's Projects

alphafold2 icon alphafold2

To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released

bioinformatics icon bioinformatics

:microscope: Path to a free self-taught education in Bioinformatics!

genocae icon genocae

Convolutional autoencoder for genotype data

gumbel-softmax icon gumbel-softmax

categorical variational autoencoder using the Gumbel-Softmax estimator

harmony icon harmony

Fast, sensitive and accurate integration of single-cell data with Harmony

hyprcoloc icon hyprcoloc

R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data

openfold icon openfold

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

pcreg icon pcreg

Principle Component Regression

pipgcn icon pipgcn

Protein Interface Prediction using Graph Convolutional Networks

structureppi icon structureppi

structurePPI: Utilities to work with protein structures

trid icon trid

Calculation of TRIple Differentiation

vireo icon vireo

Demultiplexing pooled scRNA-seq data without genotype reference

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