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Shalini's Projects

contact-density icon contact-density

Python script to align protein conformations and compute contact density.

deep-ml icon deep-ml

My solutions to ML Code Challenges on Deep-ML.com

haddock-to-snugdock icon haddock-to-snugdock

This repository provides a script to streamline the process of preparing HADDOCK output files for use in SnugDock. The script automates a sequence of pdb_tools commands to ensure compatibility.

notebook icon notebook

My online notebook - a collection of my personal notes and insights gathered during my study and work, sync’d regularly with my Obsidian vault.

rnaseq-geneexpression icon rnaseq-geneexpression

This project aims to identify gene expression patterns associated with different conditions or diseases, leveraging advanced data processing and model training techniques. The analysis includes preprocessing RNA-Seq data, training multiple classifiers, and evaluating their performance to determine the most effective models for such biological data.

rosalind icon rosalind

My solutions to Rosalind Bioinformatics problems

shalinis602.github.io icon shalinis602.github.io

Personal Website to display my projects, my learning curve, share my blog posts, and some fun stuff. It's a minimalist static site built using HTML, CSS, JavaScript and Jekyll.

webimagescraper icon webimagescraper

Python script designed to scrape images from a webpage given a URL and save them to a specified folder on your local machine.

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