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bdsrnaseqpipeline

RNA-seq pipeline for raw (fastq) file alignment, (if) trimming, (if) count and some other good stuff

bdssyntaxhighlight

BigDataScript syntax highlight plugin for Vi(m).

bigdatascript

BigDataScript: Scirpting language for big data

bio-ansible

Do bioinformatics not sys-admining - run the playbook and get back to work !

bioconda-recipes

Conda recipes for the bioconda channel.

contoso-chat-proxy

microsoft-ai-summit

d3_workshop_resbaz16

check

d3decompress

dishwasher

playing with arduino

doktor-zhivago

Доктор Живаго

dotfiles

This repository contains my configuration files for happy marriage with vim and bash

fgsea-web

firstpiproject

Simple and quick step by step tutorial introducing Raspberry Pi

genomics101

This will a series of tutorials aiming to introduce command line and common genomics file formats

googlecl

googlecl is google on command line.

hehackshehack

health hack repository 2015

jaffa

JAFFA is a multi-step pipeline that takes either raw RNA-Seq reads, or pre-assembled transcripts, then searches for gene fusions

jira-cli-wrappers

BASH scripts around jira-cli jar file to speed up and simplify access to jira

juicer-modularised

k

linux_notes

Notes about linux, how to configure and fix things

litlog

Helps me track my analysis workflow

ornet

pybam

Very simple, pure python, BAM file reader

report_template_script

Monash Bioinformatics Platform report templates markdown (and Rmd) to HTML

sabre

scarlet

Working on PTV timetable data viz and will try optimisation

scripts

a collection of python script for biological data manipulation, including graph ploting, CSV file manipulation and fasta files

serine

sik_ansible

This is ansible playbook to install RNAsik-pipeline and all associate tools