scverse Goto Github PK
Name: scverse
Type: Organization
Bio: Foundational tools for omics data in the life sciences
Twitter: scverse_team
Blog: https://scverse.org
Name: scverse
Type: Organization
Bio: Foundational tools for omics data in the life sciences
Twitter: scverse_team
Blog: https://scverse.org
Annotated data.
Use cases for anndata.
AnnData interoperability in R
Code for running benchmarks
Cookiecutter template for scverse
Example repository generated from https://github.com/scverse/cookiecutter-scverse. This repo is updated automatically to match the latest version of the template.
Registry for scverse ecosystem packages (https://scverse.org/packages/#ecosystem)
Genomic Features in Python from BioConductor's AnnotationHub
Governance docs for scverse
Multimodal Data (.h5mu) implementation for Python
Functions for analyzing and visualizing multi-condition single-cell data (prototypes created at Cambridge hackathon)
muon is a multimodal omics Python framework
Muon website
Tutorials for multimodal omics data analysis
Muon for Julia
Interactive visualization of spatial omics data
Perturbation Analysis in the scverse ecosystem.
Experimenting with a simplified plotting API for scanpy/scirpy
Jupyter notebook runner that executes preludes before each cell
Flow & mass cytometry analytics.
Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.
Single-cell analysis in Python. Scales to >1M cells.
Scanpy Tutorials.
Scanpy use cases.
A scanpy extension to analyse single-cell TCR and BCR data.
Read various formats into AnnData and MuData
Tutorials for learning scverse
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.