Name: Scott Tyler
Type: User
Company: Ideaya Biosciences
Bio: Chemistry -> bench biology -> bioinformatics -> data-scientist. NHGRI Fellow now in industry
Twitter: ScienceScottT
Location: San Francisco
Blog: www.sciencescott.com/
anti_correlation_vs_overdispersion
count_depth_effects
A small benchmark to look at the effects of different types of normalization determining the impact on distance measures
dclustval
A package for performing dense cluster validation
dim_red_st
An interactive streamlit web-app for exploring the relatinshiop between dimension reduction & intrinsic dimensions
dnabert_2
Derivative of DNABERT-2
downsample
downsample columns such that the sum is equal in all columns
orthocoder
Variational Autoencoder with modified loss function, to ensure global orthogonality to input covariates
percentmaxdiff
A metric for relative distance in Poisson sampling problems
ppi_diffusion
A repository beginning with a protein-protein interaction network, then diffusing a signal through it
pyminer
saa3_cxcl10_if
IF processing and analysis for Saa3 and Cxcl10 in trained immunity experiment
segmented_linear_model_selection
Builds segmented linear models, selecting the best fit via BIC
slicr
SLICR: Sparse Locally Involved Covariate Regression. A Python package for efficient, memory-conscious kNN distance correction, based on technical covariates whose effect should be removed
st_rle
RLE normalization (but for python ;-)
story_graph
A graph network representation of stories
synd_bert
Synthetic Biology powered by a masked transformer
towcab
Topologically Overlapping Within-Cluster/Across-Batch DEGs/pathways
umap_tsne_experiment
Testing if UMAP/tSNE overfit their intrinsic dimensionality
weighted_stats
an implementation of some fast weighted statistics
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
