Comments (3)
@fdumais any thought/preference?
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@jhlegarreta Yes, we should filter config and track group from RBx atlas that are not in our config
e.g. all config_group.json
, all track group, we also need to remove CG sub part and replace it by the whole CG
This could be done when loading files based on 1 master config
from tractolearn.
@jhlegarreta Yes, we should filter config and track group from RBx atlas that are not in our config
e.g. all config_group.json, all track group, we also need to remove CG sub part and replace it by the whole CG
This could be done when loading files based on 1 master config
Will propose a PR when I find the time.
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Related Issues (14)
- Refactoring of the field `dataset_name`
- Refactor the `main()` entire block into methods that can be re-used.
- Refactor `load_process_streamlines2` in `tractolearn/tractoio/utils.py` to avoid hardcoded values
- Refactor `generate_uuid` in `tractolearn/utils/utils.py`
- Harmonize the parsing paradigm in `scripts/ae_generate_streamlines.py` for config file
- Find a solution to remove the numpy upgrade in the README
- Add Zenodo links to the fetch data HOT 2
- Create a script called `ae_build_hdf5` HOT 1
- Add a condition in `ae_train` for the usage of COMET_ML
- Rename `ae_bundle_streamline` to `ae_finta_multibundle` and `ae_generate_streamlines` to `ae_gesta_fast` HOT 1
- Adapt/provide a script to perform plausible/implausible filtering
- Provide appropriate regex patterns to the issue body labeler
- Mismatching type causes ae_find_thresholds.py to crash while joining path. HOT 1
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