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Scientific Computing at Uppsala University's Projects

cannyfs icon cannyfs

A shim file system giving excellent throughput by assuming all I/O operations CAN complete successfully.

cnf2freq icon cnf2freq

Compute haplotype and genotype probabilities, and perform imputation, in arbitrary pedigrees, including cases under possible observational errors.

genocae icon genocae

Convolutional autoencoder for genotype data

haplocluster icon haplocluster

Clustering a set of haplotypes by successive splitting and merging steps.

mpca icon mpca

methods for handling missing data in PCA

prophaser icon prophaser

Imputation of genotype data based on the full probabilistic Li and Stephens model

sbplib icon sbplib

Matlab library for prototyping Summation-by-parts finite-differences schemes. Mirror of https://bitbucket.org/sbpteam/sbplib/

sesegpu icon sesegpu

Repository for SeSE course GPU programming for Machine Learning and Data Processing

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