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Hi 👋, I'm Sebastián

I am a young researcher and freelance data scientist, currently pursuing a master’s degree in Systems Biology at Maastricht University , the Netherlands. I have worked in Bioinformatics and Cheminformatics for five years at different laboratories.

sayalaruano

  • 🔭 I’m currently working on Network science and machine learning for drug discovery.

  • 🌱 I’m currently learning Tensorflow, Pytorch, Tidyverse, and Streamlit.

  • 🤝 Communities: International Society for Computational Biology Student Council, The Carpentries, Streamlit Creators, and Open Life Science.

  • 👨‍💻 All of my projects are available at 🌐🔗🌐.

  • 🤔 Interests: Network Science, Machine learning, Deep learning, Graph Neural Networks, Data Science, Open science, and Drug discovery.

  • ⚡ Hobbies: When I am not working, I can be found riding my mountain bike, hiking, listening to music, watching thrillers or documentary films, or reading books about science communication, mystery, or history.

  • More information about me in my personal webpage.


⚡ Github's Stats
Sebastián's Top Langs

Languages Python R bash c++ java
Database mysql firebase
DevOps git github Docker slack
UI User Interface and Scientific Design: illustrator inkscape html5 css3
Cloud heroku
Data Science and Machine Learning jupyter pandas numpy Matplotlib Sklearn Tensorflow Pytorch
OS Ubuntu Open Suse

Connect with me:

https://www.twitter.com/sayalaruano/ https://www.linkedin.com/in/sayalaruano https://orcid.org/0000-0001-9756-6745 https://www.researchgate.net/profile/Sebastian-Ayala-Ruano

Sebastián Ayala Ruano's Projects

100daysofmlcode icon 100daysofmlcode

My progress log and projects I have worked on during the 100DaysOfMLCode challenge

ampredst icon ampredst

Streamlit web application to deploy a machine learning binary classifier to predict the activity of antimicrobial peptides

bactnets-colombrainforestconv icon bactnets-colombrainforestconv

A project to evaluate the differences in bacterial association networks from rainforest and converted pasturelands in the Colombian Amazon region using CCLasso and SPRING inference methods

beta_diversity_project2022 icon beta_diversity_project2022

Scripts and data of a project about the abundance and functional diversity of species from tropical montane forests in the northwestern Pichincha in Ecuador.

capstoneproject-mlzoomcamp icon capstoneproject-mlzoomcamp

For my capstone project of the Machine Learning Zoomcamp, I decided to work in machine/deep learning binary classifiers to predict the activity of antimicrobial peptides.

cv icon cv

Curriculum vitae

dashboard_mgnify_wwt_studies_bybiome icon dashboard_mgnify_wwt_studies_bybiome

Streamlit app to show a shows a summary of the waste water treatment studies from Mgnify groped by biome and filtered by the median number of taxa per biome

denguedrugrep icon denguedrugrep

A project to predict new repurposed drugs for dengue using a biomedical knowledge graph and graph neural networks.

img2brain icon img2brain

A project to predict the neural visual responses to naturalistic scenes using machine learning. It was my capstone project of the Machine learning course from the MSc in Systems Biology at Maastricht University.

kolekti_reto_innovacion_informalidad_laboral icon kolekti_reto_innovacion_informalidad_laboral

Solución tecnológica que consiste en una página web para el registro de los datos sobre informalidad laboral en Ecuador. El registro de datos está vinculado a un servicio de red social para los trabajadores informales, donde podrán compartir experiencias y realizar contactos, encontrar recursos de desarrollo profesional y oportunidades laborales, además de promover el aprendizaje y una comunidad.

midtermproject-mlzoomcamp icon midtermproject-mlzoomcamp

For my midterm project of the Machine Learning Zoomcamp, I decided to work in the Open Bioinformatics Research Project proposed by Data Professor (https://github.com/dataprofessor). More information about this project in this video: https://youtu.be/_GtEgiWWyK4

mlbookcamp-code icon mlbookcamp-code

The code from the Machine Learning Bookcamp book and a free course based on the book

ntds2rdf icon ntds2rdf

The NTDs2RDF project aimed to create a schema and an RDF graph of proteins, metabolic pathways, drugs, and other relevant data for three NTDs (Chagas disease, leishmaniasis, and African trypanosomiasis) to integrate all the information in a single data structure that can be queried to obtain novel therapeutic insights.

rprogram-skills-expdesign-datamanag-2022 icon rprogram-skills-expdesign-datamanag-2022

This is a summary of the R programming skills sessions of the Experimental Design and Data Management (2223-MSB1005) course 2022. The course is part of the Master of Systems Biology at the Maastrich University.

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