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atlab-docs.github.io

ca_source_extraction

Matlab implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach.

commons

DataJoint schemas for neuroscience data

datajoint-matlab

High-level relational database interface for MATLAB

datajoint-python

relational data pipelines for the science lab

hdf5matlab

Library for manipulating neural data files generated in our lab

matlab-utils

Matlab utility code library

mydumper

Official mydumper project

mym

MySQL API for MATLAB with support for BLOB objects

nuitka

Nuitka as from http://nuitka.net

oopsi

up-to-date code for model-based inference of spike trains from calcium imaging

pipeline

Schemata and libraries for neuroscientific data

playtones

psychtoolbox-3

This is kleinerm's git repository for development of Psychtoolbox-3. Regular end users should stay away from it, unless instructed by him otherwise, and use the official Psychtoolbox-3 GitHub page or distribution system for production releases.

pymouse

Behavioral conditioning with mice

sessions

Core DataJoint schemas for experimental sessions

test

tiffstack

Load TIFF files into matlab fast, with lazy loading