sarastokes Goto Github PK

ao-seg

Neural nets for segmenting fluorescent neurons frimaged with adaptive optics

aodata

Framework for adaptive optics data analysis

appbox

A MATLAB toolbox for building Apps

covid19-data-import

Code for parsing COVID-19 datasets along with generic instruction on data importing in MATLAB

described-data

Classes for adding metadata to MATLAB numeric data types

dualao-package

Protocols for flood and SLO arms

exvivoerg

import and analyze ex vivo ERG data

facile-tools

Tools for segmentation and analysis of GCaMP6-expressing RGCs imaged in vivo with adaptive optics

faoslo-online

Online analysis for calcium imaging with fluorescence adaptive optics scanning laser ophthalmoscopes

foveal-spectral-tuning

Code related to a paper on foveal spectral tuning

fvmtalk2017

Code used in my Fall Vision Meeting talk about the retinal ganglion cells underlying yellow hue perception

h5tools-matlab

A toolbox of high-level functions for working with HDF5 files in MATLAB

igor-tools

useful routines for publication-quality figures in igor pro

imagej-tools

Useful routines for ImageJ

keymaps

Keymaps for my mechanical keyboards

mindreading

noncardinalrgcs

Code related to non-cardinal RGC paper

oct-tools

Segmentation and analysis of choroid and retinal layers from OCT b-scans

patterson-package

Retinal physiology experiment protocols 2.0

patterson-package-v2

Electrophysiology protocols

preprocessing-tools

Workflow for preprocessing functional imaging data

psychophysics

py-sbfsem

A Python package for Viking connectomics

qmk_firmware

Open-source keyboard firmware for Atmel AVR and Arm USB families

rabbitgammacell

Code and data used in Bordt et al (2019) Synaptic inputs and connectivity of a sparsely branched ganglion cell in rabbit retina

roiviewer

Standalone region of interest response viewer

sara-aodata-package

Personal package for AOData

sara-package

Retinal physiology experiment protocols

sarastokes.github.io

sbfsem-tools

Matlab toolbox for connectomics analysis and rendering