Giter Club home page Giter Club logo

Saugat Poudel's Projects

amr_pangenome icon amr_pangenome

Pan-genome construction/analysis tools centered around PATRIC and antimicrobial resistance

metabs-paper-code icon metabs-paper-code

Code and interim data for the manuscript "Coordination of CcpA and CodY regulators in Staphylococcus aureus USA300 strains"

scidata_rnaseq_workflow icon scidata_rnaseq_workflow

RNAseq Workflow used in publication "Characterization of CA-MRSA TCH1516 exposed to Nafcillin in Bacteriological and Physiological Media"

tch1516_batchcorrection_scidata icon tch1516_batchcorrection_scidata

This repo demonstrates the code used to correct batch effects in RNAseq data. It is used and shared as part of the publication: Characterization of CA-MRSA TCH1516 exposed to Nafcillin in Bacteriological and Physiological Media

twopaco icon twopaco

A fast constructor of the compressed de Bruijn graph from many genomes

usa300gwaspub icon usa300gwaspub

Results, data, model and code for the paper 'Interpreting roles of mutations associated with the emergence of S. aureus USA300 strains using transcriptional regulatory network reconstruction'

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.