Comments (2)
Hello,
You can use this fork of seroBA to run with PneumoCaT v1.2.1: https://github.com/sanger-bentley-group/seroba
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Thanks, @Oliver-Lorenz-dev .
I will try out the forked version's code.
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Related Issues (20)
- 11A/11C Misidentification HOT 4
- Default for runSerotyping coverage not being set correctly HOT 1
- Got an error massage through docker with Ubuntu20.04 LTS HOT 1
- biopython issue!
- Can't build the ariba database HOT 1
- Dependencies issues when using seroba through conda HOT 7
- latest build on docker hub is non functional
- Conda install 'createDBs' and 'getPneumocat' errors HOT 1
- Hi..any suggestions on how this error was resolved for you? HOT 1
- serotyping from assemblies as input HOT 3
- Seroba test error while installed with conda
- Error: HOT 1
- Names for forwards and reverse reads does not match. Cannot continue HOT 1
- Job runs for 17+ hours without completion
- Swiss_NT HOT 1
- TypeError: argument of type 'NoneType' is not iterable HOT 5
- errors during installation via conda/mamba HOT 2
- There is not detailed_serogroup_info in the output folder HOT 2
- Error on database HOT 1
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