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AndrewCBarnes avatar AndrewCBarnes commented on September 17, 2024 1

I fixed this by downgrading mummer. Build 12 introduces a bug that directs to an incorrect location for perl. You need to install build mummer=3.23=h6de7cb9_11. Hope this works for you. If you are running circlator in conda, just activate the conda environment containing circlator and
conda install mummer=3.23=h6de7cb9_11

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Nifaste avatar Nifaste commented on September 17, 2024

@davidjstudholme I have the same issue, did you managed to solved it ?

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davidjstudholme avatar davidjstudholme commented on September 17, 2024

No, I don't recall seeing anything about this since I reported the issue.

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