Comments (1)
The way to denote the equivalent of SAM's SEQ being *
in BAM is indeed to write the record with l_seq as 0. This is what the major implementations have always done and is consistent with the spec's description of l_seq.
To be sure, it's not obvious from the spec and we should add a footnote spelling this out.
from hts-specs.
Related Issues (20)
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from hts-specs.