samlipworth Goto Github PK
Name: Sam Lipworth
Type: User
Bio: Clinical Research Fellow in Infection at the University of Oxford.
Twitter: samlipworth
Location: Oxford
Name: Sam Lipworth
Type: User
Bio: Clinical Research Fellow in Infection at the University of Oxford.
Twitter: samlipworth
Location: Oxford
Bayesian inference of ancestral dates on bacterial phylogenetic trees
Changes bases in a fasta file at user specified positions
Adds binder to tidyverse, providing JupyterHub
Classification of Cases into Deterministic Categories
Coronavirus (COVID-19) in the UK - API Service SDK for R
Diabetes complication severity index
a signal-level demultiplexer for Oxford Nanopore reads
:dragon: :fly: Assemble bacterial isolate genomes from Nanopore reads
A repository to accompany the paper "Estimating the effect of antimicrobial resistance genes on minimum inhibitory concentration in Escherichia coli"
Quickly create elegant regression results tables and plots when modelling in R
Gene-flank analysis tool
Binder repo for making figures in Matlock/Lipworth et al (Flanker Paper)
ggplot-based graphics and useful functions for GAMs fitted using the mgcv package
Mycobacterium tuberculosis complex SNP barcoding, after Coll 2014
ariba library for predicting clarithromycin resistance in M. abscessus
learning to use nf
Code used for analysis in the paper Optimised use of Oxford Nanopore Flowcells for Hybrid Assemblies (Lipworth et al 2020)
An updated pipeline for pangenome investigation
A toolbox for pangenome analysis and threshold evaluation.
SEER, reimplemented in python 🐍🔮
Repository to accompany paper
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.