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Sagar's Projects

3dct icon 3dct

This Toolbox is build for 3D correlative microscopy. It helps with 3D to 2D correlation of three dimensional confocal image stacks to two dimensional SEM/FIB dual beam microscope images.

eman2 icon eman2

A scientific image processing software suite with a focus on CryoEM and CryoET

minimalistic-flat-modern-gui-template icon minimalistic-flat-modern-gui-template

A Free to use, Beautiful, Feature Rich, Fully Customizable Flat Modern GUI Template Using Pyside2 designed in Qt Designer, supported for Windows/Linux/Mac OS, Incorporating widgets like Buttons, Progress Bar, Custom Tabs, and many more.

montage icon montage

Determining the most efficient tiling strategy for montage cryo-electron tomography

novactf icon novactf

3D-CTF correction for cryo-electron tomography

novasta icon novasta

Subtomogram averaging package based on TOM/AV3

relion icon relion

Image-processing software for cryo-electron microscopy

septa icon septa

SerialEM python toolbox for tilt series acquisition

spider icon spider

SPIDER (System for Processing Image Data from Electron microscopy and Related fields) is an image processing system for electron microscopy, especially usefull for single-particle reconstruction.

stopgap icon stopgap

STOPGAP is a MATLAB-based package for subtomogram averaging.

try-manubot icon try-manubot

A repository to practice contributing to a Manubot manuscript

xmipp icon xmipp

All Xmipp except Core and Visualization

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