Comments (4)
The issue with your Knowledge Graph (KG) index returning empty responses when loaded from persistent storage, despite the storage index files appearing to be correctly populated, could be due to the "text"
field being null
in the index_struct
.
In the provided JSON structure, the "text"
field is set to null
:
{
"index_struct": {
"text": null,
"doc_id": "446680de-660e-421a-8fdc-ed244bd466ce",
"embedding": null,
"extra_info": null,
"table": {
...
}
}
}
The text
field is crucial for the Knowledge Graph to return meaningful responses. If this field is null
, the index might not have the necessary data to generate responses, leading to empty results.
Additionally, ensure that the storage_context
provided to the KnowledgeGraphQueryEngine
includes a valid graph_store
. The graph_store
is essential for querying and retrieving data from the Knowledge Graph. If the graph_store
is not correctly set up or is missing, the query engine will not be able to retrieve any data, resulting in empty responses.
To resolve this, ensure that:
- The
text
field is correctly populated with the relevant data when saving the index to persistent storage. - The
storage_context
includes a validgraph_store
when initializing theKnowledgeGraphQueryEngine
.
Here is an example of how the KnowledgeGraphQueryEngine
should be initialized:
storage_context = StorageContext(graph_store=your_graph_store)
query_engine = KnowledgeGraphQueryEngine(storage_context=storage_context)
Make sure that your_graph_store
is properly configured and contains the necessary schema and data.
Additionally, if you are using the KnowledgeGraphIndex
class from the LlamaIndex framework, ensure that the graph_store
is correctly populated. The class includes a mechanism to upgrade previously saved KG indexes to a new storage format if necessary:
if (
len(self.index_struct.table) > 0
and isinstance(self.graph_store, SimpleGraphStore)
and len(self.graph_store._data.graph_dict) == 0
):
logger.warning("Upgrading previously saved KG index to new storage format.")
self.graph_store._data.graph_dict = self.index_struct.rel_map
This ensures that the graph_store
is correctly populated with the relationship map from the index_struct
. If this upgrade step is not performed, the graph_store
might remain empty, leading to empty responses.
Moreover, you can refer to the test_load_graph_from_storage_simple
function from the LlamaIndex tests to understand how to properly load a graph from storage. Here is a simplified version of the test:
def test_load_graph_from_storage_simple(
documents: List[Document],
tmp_path: Path,
mock_service_context: ServiceContext,
) -> None:
storage_context = StorageContext.from_defaults()
vector_index_1 = VectorStoreIndex.from_documents(
documents=documents,
storage_context=storage_context,
service_context=mock_service_context,
)
vector_index_2 = VectorStoreIndex.from_documents(
documents=documents,
storage_context=storage_context,
service_context=mock_service_context,
)
summary_index = SummaryIndex.from_documents(
documents=documents,
storage_context=storage_context,
service_context=mock_service_context,
)
graph = ComposableGraph.from_indices(
SummaryIndex,
children_indices=[vector_index_1, vector_index_2, summary_index],
index_summaries=["vector index 1", "vector index 2", "summary index"],
storage_context=storage_context,
service_context=mock_service_context,
)
query_engine = graph.as_query_engine()
response = query_engine.query("test query")
storage_context.persist(str(tmp_path))
new_storage_context = StorageContext.from_defaults(persist_dir=str(tmp_path))
new_graph = load_graph_from_storage(
new_storage_context, root_id=graph.root_id, service_context=mock_service_context
)
new_query_engine = new_graph.as_query_engine()
new_response = new_query_engine.query("test query")
assert str(response) == str(new_response)
This test ensures that the graph is correctly loaded from storage and that the query responses remain consistent [1][2][3][4].
To continue talking to Dosu, mention @dosu.
from llama_index.
To ensure your rel_map
is populated when creating and storing your persistent storage, you need to call the get_rel_map
method after inserting or updating your data. Here is an example of how you can update your script to include this step:
class SimpleGraphStore(GraphStore):
"""Simple Graph Store.
In this graph store, triplets are stored within a simple, in-memory dictionary.
Args:
simple_graph_store_data_dict (Optional[dict]): data dict
containing the triplets. See SimpleGraphStoreData
for more details.
"""
def __init__(
self,
data: Optional[SimpleGraphStoreData] = None,
fs: Optional[fsspec.AbstractFileSystem] = None,
**kwargs: Any,
) -> None:
"""Initialize params."""
self._data = data or SimpleGraphStoreData()
self._fs = fs or fsspec.filesystem("file")
def upsert_triplet(self, subj: str, rel: str, obj: str) -> None:
"""Add triplet and update rel_map."""
if subj not in self._data.graph_dict:
self._data.graph_dict[subj] = []
if [rel, obj] not in self._data.graph_dict[subj]:
self._data.graph_dict[subj].append([rel, obj])
# Update rel_map after upserting the triplet
self.rel_map = self.get_rel_map(subjs=[subj])
def get_rel_map(
self, subjs: Optional[List[str]] = None, depth: int = 2, limit: int = 30
) -> Dict[str, List[List[str]]]:
"""Get depth-aware rel map."""
return self._data.get_rel_map(subjs=subjs, depth=depth, limit=limit)
# Example usage
graph_store = SimpleGraphStore()
graph_store.upsert_triplet("Software", "Mention in", "Footnotes")
print(graph_store.rel_map)
In this example, after upserting the triplet, the get_rel_map
method is called to update the rel_map
with the new relationships. This ensures that rel_map
is always populated with the latest data [1][2][3][4][5].
To continue talking to Dosu, mention @dosu.
from llama_index.
Im still confused, how can I update my script to ensure my rel_map is populated when creating and storing my persistent storage?
@dosu
from llama_index.
Hey @logan-markewich I have tried to understand the following from dosubot, but I am struggling to implement correctly. I would just like to be able to load my created vector and graph indices from the persistent directory without having to connect to my nebula graph server. Is this even possible?
The reason why I want to populate the rel_map, which is empty within my index_store.json (graph store), is because I am assuming that my relationships are supposed to be present here for when I call this persistent dir when I am querying with these indices.
Do you suggest anything I can do, my ultimate goal is to deploy this application without requiring a constant connection to my nebula graph?
from llama_index.
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from llama_index.