Jeffrey Ross-Ibarra's Projects
Lesson for the shell for genomics
Adds binder to tidyverse, providing JupyterHub
Lab website - using Jekyll/Bootstrap
CNIC grant
Style sheets (and some tgz/zip sources) from IEEE, Springer Verlag, ACM, and CLRS (the algorithms book)
Curriculum Vitae
Repo for working CV.
RNA-seq pipeline for UCD farm job submission
Issue tracker and Web site for the Lab for Data Intensive Biology at UC Davis.
calculates dice distance from ms data using libsequence
Extensive de-novo TE Annotator
fwdpp is a C++ template library for implementing efficient forward-time population genetic simulations
Research repo for Yang et al., 2017 paper.
modification of K Thornton's HBK_permute program
ne estimates from ibd
efficient, forwards-time simulation of populations on raster-based landscapes