Error : 'validate_file_names' is not an exported object from 'namespace:EDIutils' about ediutils HOT 6 CLOSED

I had MetaShARK built with a dockerfile relying on a newer version of EAL and the issue was gone. Let's just keep it open a few days more if you will, so that @yvanlebras and I can assess it was due to an older version of EAL used in MetaShARK.
I appreciate your efficiency for this issue.

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Thanks for the notification @yvanlebras. The error you're running into may be related to the recent EDIutils refactor (see here for some context).

There's a good chance this error is arising from a previous release of EMLassemblyline that depended on the now deprecated version of EDIutils. The newest EMLassemblyline doesn't have this dependency and should work with MetaShARK. Try reinstalling EMLassemblyline remotes::install_github("EMLassemblyline") and/or the deprecated EDIutils (remotes::install_github("EDIutils", ref = "deprecated").

I've relayed this information to @earnaud and it sounds a fix on the MetaShARK side is underway.

Please let me know if the issue persists, and my apologies for the inconvenience.

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Hi !
covidded @earnaud is back. I am checking this issue back: in definitive, if EDIutils dependency removed from EMLassemblyline, it shall be ok. Testing right now and ... I still get the error. To be sure: I shall use the current development branch of EAL?

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Welcome back @earnaud!

I just verified EMLassemblyline (all branches) and MetaShARK (master) do not use EDIutils or the function validate_file_names(), so I'm not sure why this is occurring. Only recommendation I have is to double check the EAL installation and verify EDIutils is not being called from MetaShARK.

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@earnaud Has this issue been resolved?

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I believe it is, indeed.

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