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reconhub

This packages installs and loads all stable RECON packages similiar to the tidyverse package.

Installing the package

To install the current stable, CRAN version of the package, type:

install.packages("reconhub")

To benefit from the latest features and bug fixes, install the development, github version of the package using:

devtools::install_github("reconhub/reconhub")

Note that this requires the package devtools installed.

What does it do?

# attaches all stable recon packages
library(reconhub)
## Attaching package epicontacts

## Attaching package outbreaks

## Attaching package incidence

Also, you can install all development versions of RECON packages:

reconhub::install_dev_versions()

Getting help online

Bug reports and feature requests should be posted on github using the issue system. All other questions should be posted on the RECON forum:
http://www.repidemicsconsortium.org/forum/

Contributions are welcome via pull requests.

Please note that this project is released with a Contributor Code of Conduct. By participating in this project you agree to abide by its terms.

R Epidemics Consortium's Projects

aweek icon aweek

Convert dates to arbitrary week definitions :calendar:

coxbazaar icon coxbazaar

Case study dealing with an outbreak of Diphtheria in Cox Bazaar, Bangladesh. Covers: Basic contact tracing, estimates of R/R0, Random Spatial Sampling and Sitrep Generation in Rmarkdown

deployer icon deployer

Self-contained R environment on a thumb drive

dibbler icon dibbler

Investigation of food-borne disease outbreaks

distcrete icon distcrete

:chart_with_upwards_trend::point_right::bar_chart: Discretise distributions

docker icon docker

Various docker images for RECON

drat icon drat

:package::package::package: drat repository

earlyr icon earlyr

Estimation of infectiousness in the early stage of an outbreak, with short-term predictions.

epicontacts icon epicontacts

Handling, Visualisation and Analysis of Epidemiological Contacts

epiflows icon epiflows

☣:airplane: Risk assessment of travel-related disease spread

epirisk icon epirisk

Epidemiological risk calculator for outbreak response

epitrix icon epitrix

Small Helpers and Tricks for Epidemics Analysis

gisfirstaid icon gisfirstaid

A collection of code gists for mapping infectious diseases

guides icon guides

Recon's guidelines for writing statistical analyses reports

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