Name: Ryan Cubero
Type: User
Company: Institute of Science and Technology Austria
Bio: Science enthusiast who cracks own head for a living and fervently seeks enlightenment from Rev Fr Thomas Bayes
Twitter: ryan_cubero
Location: Klosterneuburg, Austria
Blog: https://about.me/rcubero
Ryan Cubero's Projects
Finding gene expression states in scRNA-seq data
Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans
JAX-based neural network library
generalized principal component analysis (GLM-PCA) implemented in python
The GUDHI library is a generic open source C++ library, with a Python interface, for Topological Data Analysis (TDA) and Higher Dimensional Geometry Understanding.
An increasingly less-brief guide to Mastodon
Hopfield Networks is All You Need
Imaris file format reader
Fast spike sorting with drift correction for up to a thousand channels
KNOSSOS is a software tool for the visualization and annotation of 3D image data and was developed for the rapid reconstruction of neural morphology and connectivity.
https://github.com/PeterBeemiller/ImarisReader
Where microRNA bioinformatic analyses codes are deposited
Topological data analysis tool to map microglia morphology along sex- and brain-region-specific spectra
neuron morphology processing tools
Calculates the multiscale relevance of neurons
Topological Neuron Synthesis
Prize-Collecting Steiner Forests for Interactomes
phy: interactive visualization and manual spike sorting of large-scale ephys data
Codes used to analyse calcium imaging data from PPC and M2
This is a ten hour course on preprints and publishing in life or biomedical sciences. It has been created by ASAPbio 2020 fellows group with the support of ASAPbio.
Library for diffusion maps
Ripser: efficient computation of Vietoris–Rips persistence barcodes
Deep generative modeling for single-cell transcriptomics
A python package for the topological analysis of neurons.
React
Typescript
Django
Laravel
Facebook
Microsoft
Google
Alibaba
D3
Tencent