razofz Goto Github PK

adventofcode2020

My solutions to this year's Advent of Code https://adventofcode.com/2020

aoc22

Advent of Code 2022

apollo

Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.

cb_fl

Accompanying code for: Single-cell multiomics of human fetal hematopoiesis defines a developmental specific population and a fetal signature

cb_lab_cookiecutter

Template to generate analysis project structure for bioinformaticians in the Charlotta Böijers lab at Lund University.

db_akc_citeseq

Accompanying code for analysis of manuscript in Nature Aging: Implications of stress-induced gene expression for hematopoietic stem cell aging studies

db_qz_multiome

Multiome (RNA+ATAC from same cell) data generated by Qinyu Zhang in David Bryder's lab. Paper here: https://doi.org/10.7554/eLife.91826.2

docker-stacks

Ready-to-run Docker images containing Jupyter applications

dotfiles

my dotfiles

eda095_lab3

edan20_mnx10jpa_muh11rol

fullpage.js

fullPage plugin by Alvaro Trigo. Create full screen pages fast and simple

gohugo-theme-ananke

Ananke: A theme for Hugo Sites

hackatum18

hallo-hugo

Hallo is a single-page Hugo theme to introduce yourself.

helper-scripts

A collection of scripts that are useful to me

myfirstapp

My first Android app. It's done as a part of an assignment of a course at LTH, namely [MAMN01]

nabo

Python library to perform memory efficient cross-sample cell mapping using single cell transciptomics (scRNA-Seq) data

piaette

project2

XL

python-interrogate-check

GitHub Action for use with python package interrogate

razfall

an attempt at implementing the spyfall game

razofz.github.io

Github Pages (new version)

regnmf

rosalind

A repo for rosalind.info problems

scarf-1

Toolkit for highly memory efficient analysis of single-cell RNA-Seq, ATAC-Seq and CITE data. Analyze atlas scale datasets with millions of cells on laptop.

sec_of_a_spider

ssomaker

A Shiny webapp for creating a Seurat object without programming expertise. Load a count matrix directory, interactively filter on metadata, view results, download Seurat object and results of differential gene expression testing.

stefanometern

hack the crisis

tai