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Ramachandran Lab's Projects

archaic-chrx-sexbias icon archaic-chrx-sexbias

Code and data to reproduce main figures and simulations of Chevy, Huerta-Sanchez, and Ramachandran, 202X

esnn icon esnn

Code and simulations using an Ensemble of Single-Effect Neural Networks (ESNN)

genee icon genee

An Association Test for Aggregated Sets of SNP-Level Summary Statistics

hebae icon hebae

Code and Analyses using the Hierarchical Empirical Bayes Autoencoder (HEBAE)

pegasus icon pegasus

Scripts and references files for PEGASUS software for calculating gene-level p-values from GWA p-values

pegasus_flies icon pegasus_flies

Application of the PEGASUS gene-level association test to the Drosophila Genome Reference Panel

pong icon pong

Fast analysis and visualization of latent clusters in population genetic data

swifr icon swifr

Sweep Inference Framework (controlling for correlation)

upd_detector icon upd_detector

code and classifier parameters for ROH-based UPD detection

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