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badgers

donuts

DONUTS: Decomposing nature and nurture using GWAS summary statistics

gnova-2.0

A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.

gsub

An analytical approach for GWAS-by-Subtraction

origami

parsec

partitioning heritability and genetic covariance by direct and indirect paths

penguin

A variance component analytical framework to control for genome-wide confounding effects in epidemiologic association studies.

pigeon

Polygenic gene-environment (GxE) interactions inference

pop-tools

Valid and Powerful ML-Assisted Genetic Association Studies

popinf

Assumption-Lean and Data-Adaptive Post-Prediction Inference

prs-demo

Train and calculate PRS scores using popular PRS methods.

psps

Task-Agnostic Machine Learning-Assisted Inference

pumas

Fine-tuning polygenic risk score models using GWAS summary statistics

quail

A unified framework to estimate genetic effects on the variance of quantitative traits

supergnova

titans

x-wing

Cross-population weighting framework to improve genetic risk prediction in ancestrally diverse populations