qiyubio Goto Github PK
Name: Qi Yu
Type: User
Company: NIH
Bio: computational biologist
Location: Bethesda
Qi Yu's Projects
3d
braker_singularity
Singularity def file template for BRAKER
cerberus
configs
Config files used to define parameters specific to compute environments at different Institutions
cutruntools2_singularity
datasharing
The Leek group guide to data sharing
dlc_singularity
docs
TensorFlow documentation
genetics
R code for plot figure1 of "Interrogating the Functions of PRDM9 Domains in Meiosis"
geomxtools
Tools for NanoString GeoMx Digital Spatial Profiler data for reading DCC and PKC files to NanoStringGeomxSet class, Normalization and QC.
hic-pro
HiC-Pro: An optimized and flexible pipeline for Hi-C data processing
mamba
The Fast Cross-Platform Package Manager
nf-co.re
Code and files for the main nf-core website.
pacvim
r4ds
R for data science
rdco
code
readthedocs
Documentation for the Google Genomics cookbook.
rtea
sarek
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
scvi-tools
Deep probabilistic analysis of single-cell omics data
sequencing-tricks
tricolor
Tandem Repeats Caller for LOng Reads
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