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Juan's Projects

aucell icon aucell

AUCell: score single cells with gene regulatory networks

bmc-microarray icon bmc-microarray

This repo contains the knitr code for the paper: Gillespie, C. S., et al, 2010. Analysing yeast time course microarray data using BioConductor: a case study using yeast2 Affymetrix arrays BMC Research Notes, 3:81.

clusterprofiler icon clusterprofiler

:bar_chart:statistical analysis and visualization of functional profiles for genes and gene clusters

edge icon edge

R package for identifying differentially expressed genes from genome-wide gene expression profiling studies.

fly_us icon fly_us

美国大学备考资料 How to apply US colleges

gatk icon gatk

Official code repository for GATK versions 4 and up

go icon go

The Open Source Data Science Masters

gre icon gre

GRE备考资料分享

idep icon idep

iDEP: integrated Differential Expression & Pathway analysis

limma icon limma

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/limma.html Contributions: http://bioinf.wehi.edu.au/limma. Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=limma.

monocle2-rge-paper icon monocle2-rge-paper

Scripts needed to generate the figures for the Monocle 2 paper (Qiu et al, 2017)

mstate icon mstate

:exclamation: This is a read-only mirror of the CRAN R package repository. mstate — Data Preparation, Estimation and Prediction in Multi-State Models. Homepage: https://www.lumc.nl/org/bds/research/medische-statistiek/survival-analysis/

my-git icon my-git

Individual collecting material of learning git(有关 git 的学习资料)

pisces icon pisces

Global spectral clustering in dynamic networks

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