Comments (4)
Normally, LiberTEM should be installed automatically since it is a dependency of the ptychography40
package:
Line 86 in f64e89a
Was it missing on your system when you installed ptychography40
?
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[...] I have issues since I am running python3.9 instead of 3.7 (I assume). I am currently downgrading debian "testing" back to "stable". Than I will give it another try.
Yes, Python 3.9 support is discussed in this issue: LiberTEM/LiberTEM#914 which is believed to be an upstream issue in CPython, see discussion here: dask/distributed#4168
For Debian, I would strongly suggest to use miniconda to create isolated virtual environments - then you are independent of the system Python interpreter. The problem is you can only install one version of system Python 3 at a time, so once testing or unstable updates the Python version, you have a problem. Sometimes, even minor upgrades break virtual environments. This doesn't happen with conda-created venvs. Downgrading to Debian stable could be painful, as I don't think that is officially supported.
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Ok. Downgrading is painful! However, I could manage to get back to Debian current "testing" distribution, aka bullseye.
I followed the above suggestion and installed miniconda and created a python-3.7 based environment there.
Now, imports are working fine, except for hyperspy requesting more recent packages. I obeyed this by installing hyperspy explicitly to pull the required package versions.
Libertem was installed automatically. The issue remains, but for this the current title is wrong. Will open a new issue and close this one here.
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Related Issues (20)
- updating EPIE-Alpaka to latest version HOT 1
- test of GPU version for CDI HOT 3
- Alpaka EPIE version HOT 1
- Distributing the software HOT 6
- Poster for Helmholtz Imaging Platform matchmaking workshop HOT 2
- Update the install instructions for the alpaka binding prototype HOT 1
- Missing requriement documentation for the SSB prototype
- Release version 0.1 with SSB and stitching HOT 13
- Rename the source folder? HOT 1
- Documentation update: Instruct users to fork!
- Document `if __name__ == "__main__": ...` in SSB example (was: Error in SSB example) HOT 7
- Collect Numba coverage HOT 2
- Tests w/ data access in CI
- Test on Python 3.11 HOT 1
- Compare with other implementation(s)
- Numba code coverage HOT 2
- Link to publications in the docs
- Check meaningful SSB parameters HOT 1
- Update notebook ssb-live-reconstruction.ipynb with new LiberTEM-live API
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