ptdolan Goto Github PK
Name: Patrick Dolan
Type: User
Company: @NIAID
Bio: Unit Chief, Quantitative Virology and Evolution Unit, NIH-NIAID-DIR-LVD.
Twitter: drptdolan
Location: Bethesda, MD
Blog: http://qveu.bio
Name: Patrick Dolan
Type: User
Company: @NIAID
Bio: Unit Chief, Quantitative Virology and Evolution Unit, NIH-NIAID-DIR-LVD.
Twitter: drptdolan
Location: Bethesda, MD
Blog: http://qveu.bio
Investigations in Aging
Anno is a variant annotation tool
Pipeline for Ancestral State Reconstruction
Scripts for normal mode analysis (pkg: bio3d) and downstream plotting in R
Annotation and Analysis of Deep Sequencing Variants from CirSeq
Dengue Modeling HQ
Quick script for generating dot plots from bio sequence data
»Feeling Responsive« is a free flexible theme for Jekyll built on Foundation framework. You can use it for your company site, as a portfolio or as a blog.
Viral quasispecies assembly via maximal clique finding. A method to reconstruct viral haplotypes and detect large insertions and deletions from NGS data.
RNAseq analysis of RNAseq data from differentiating murine NSCs
Nascent step-by-step phylogenetics instructions and tutorials.
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Collection of scripts for mapping values from R onto pdb files as b-factor. Requires `Rpdb` and `bio3d` packages.
Python utilities
QVEU webpage
Code generated in the QVEU
RNAseq pipeline examples
Useful r scripts
Collection of data and scripts for Andino lab efforts in coronavirus
Search Tools for EVEs: EVE search, annotation and comparison tools.
Analysis for Nat. Comm. Xiao, Dolan et al.
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