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bids-starter-kit

Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets

bparc

A supervised image segmentation framework for fMRI data (Brain Parcellation)

brainnetclass

brainstorm-to-cosmo

Converts EEG epochs exported from Brainstorm into CoSMoMVPA format

eeg-poplsregression-cognitivereserve

Parallel and orthogonalized partial least squares (PO-PLS) multiblock regression was used in order to investigate associations between a comprehensive cognitive reserve proxy and functional connectivity of the prefrontal cortex across the whole scalp, covarying for the level of current cognitive functioning.

essentialeeganalysis

fmriflows

fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st and 2nd-level analysis, as well as multivariate pattern analysis.

functional_connectivity_pipeline

Matlab files to run rest state and task-based functional connectivity

ggplot-to-ppt

Saving editable ggplots in PowerPoint

gramm

Gramm is a complete data visualization toolbox for Matlab. It provides an easy to use and high-level interface to produce publication-quality plots of complex data with varied statistical visualizations. Gramm is inspired by R's ggplot2 library.

himalaya

Multiple-target linear models - CPU/GPU

mcot

Multiband Censoring Optimization Tool (MCOT) for Resting-State Functional Connectivity Analyses

mriqual

A Matlab toolbox for examining the quality of structural (SNR) and functional (tSNR, SFNR) MRI

mssd_classification

pattern_regression_clean

Codes for pattern regression with detailed manual

plsr-da_matlab

A custom toolkit to implement partial least squares regression (PLSR) and discriminant analysis (PLSDA) in MATLAB.

project_fc-variability

psyence221b.github.io

A repository for my CV, studies, and lectures

pyrcca

Regularized kernel canonical correlation analysis in Python

relax

roiconnect

ROI connectivity analysis in EEG

violinplot-matlab

Violin Plots for Matlab