David Chin's Projects
100 days of algorithms
Advent of Code puzzles
Agnoster Theme for Bash
Implementation of Algorithms and Data Structures, Interview Questions and Answers
Singularity recipe for AlphaFold
Automated Password Generator
Original Apollo 11 guidance computer (AGC) source code digitized by folks at Virtual AGC (http://www.ibiblio.org/apollo/) and MIT Museum.
Apptainer: Application containers for Linux
Just a simple christmas tree, based on redit story
Genome annotation with AUGUSTUS
Automatic quality control for FASTQ sequencing files
Automated Mass Exploiter
BamM
general purpose library for evaluating the likelihood of sequence evolution on trees
Automatically exported from code.google.com/p/beijingair
Speed benchmark of Stata and R on common data manipulations
Bibliographies of interest to myself
Unsupervised Clustering of Environmental Microbial Assemblies Using Coverage and Affinity Propagation
Automatically exported from code.google.com/p/blacktree-nocturne
This the comparison between the speed of C and Rust
Test scripts to automate CB Fixes and Tweaks
Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Login scripts for my Chromebook
Code base for the U.S. EPA’s Community Multiscale Air Quality Model (CMAQ). For additional background on CMAQ please visit: www.epa.gov/CMAQ
A control repository template
Utilize 100% CPU on all available cores from the command line.
Cron helper by Brady Catherman @liquidgecka
Delorean: Time Travel Made Easy
Accelerated BLAST compatible local sequence aligner.