plijnzaad Goto Github PK
Name: Philip Lijnzaad
Type: User
Company: Princess Maxima Center for Pediatric Oncology
Bio: works at the Princess Maxima Centre for Pediatric Oncology, Utrecht, Holland.
Location: Utrecht, Holland
Name: Philip Lijnzaad
Type: User
Company: Princess Maxima Center for Pediatric Oncology
Bio: works at the Princess Maxima Centre for Pediatric Oncology, Utrecht, Holland.
Location: Utrecht, Holland
some data and templates for an slightly more advanced git course
An NGS read trimming tool that is specific, sensitive, and speedy. (production)
scRNA-seq cell type identification
chimeraviz is an R package that automates the creation of chimeric RNA visualizations.
Code for demultiplexing fastq files, and a library for flexibly allowing mismatches during barcode recognition. **This code has moved to https://bitbucket.org/princessmaximacenter/demultiplex .**
This is the ensembldb development repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/ensembldb.html Contributions: https://github.com/jotsetung/ensembldb. Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=ensembldb or https://github.com/jotsetung/ensembldb/issues.
Single RNA-seq data analysis with R (Finland, May, 2019)
FusionAnnotator source code
source code for FusionFilter
FusionInspector code
Bioinformaticians at the Hubrecht Institute
Exercises for the UBC Master's course Introduction to Bioinformatics for the Life Sciences
Inferring CNV from Single-Cell RNA-Seq
Notebooks for the big data group
various tools. Mostly shell, perl and R
program to detect hydrophobic patches on protein surfaces
Workshop on Reproducible Science using Jupyter notebooks
Planning and web page for RSG workshsop
Scripts and tools for single cell RNAseq. This code has moved to https://bitbucket.org/princessmaximacenter/scseq/
Extra material for Software Carpentry shell lesson.
scripts and functions to analyse single-cell sequencing data. This code has moved to https://bitbucket.org/princessmaximacenter/platediagnostics
STAR-Fusion codebase
WDL Analysis Research Pipelines
WDL (Workflow Description Language) major mode
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.