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This is the repo for the BigBrain website at bigbrainproject.org
APPIAN is an open-source automated software pipeline for analyzing PET images in conjunction with MRI. The goal of APPIAN is to facilitate reproducible research and to make PET tracer kinetic data analysis easier for users with moderate computing skills.
Help and collaboration
BrainSpell solely houses neuroimaging stereotaxic coordinates. Expanding the BrainSpell database to include βomicsβ data from neuronal, neurovascular and cerebrospinal fluid (CSF) studies would better facilitate multimodal analysis. In concert with the neuronal component, a healthy cerebral circulation is essential for maintaining brain perfusion and function. The CSF supports/cushions the brain, circulates nutrients obtained from the blood, and removes waste products. Observed changes in brain function in health or disease could be due to underlying alterations in any or all of the above components. The proposed changes to BrainSpell will enable users to integrate multiple streams of information and have a better view of the big picture.
fMRIprep is a functional magnetic resonance image pre-processing pipeline that is designed to provide an easily accessible, state-of-the-art interface that is robust to differences in scan acquisition protocols and that requires minimal user input, while providing easily interpretable and comprehensive error and output reporting.
Collaborative vectorial annotation tool for ultra high resolution data
NeuroData Science Lab Website
Making neuroimaging open from the grounds (consent form) and up (tools)
Notebooks for the Berkeley course on practical neuroimaging
A python interface to the MINC 2 library, allowing use of numpy arrays to access MINC data, and other such similar goodies, developed by Jason Lerch
Statistics for MINC volumes: A library to integrate voxel-based statistics for MINC volumes into the R environment. Supports getting and writing of MINC volumes, running voxel-wise linear models, correlations, etc.; correcting for multiple comparisons using the False Discovery Rate, and more. With contributions from Jason Lerch, Jim Nikelski and Matthijs van Eede. Some additional information can be found here:
A list of tutorials and other resources useful to learn open science and neuroimaging, EEG and MEG
A declarative, efficient, and flexible JavaScript library for building user interfaces.
π Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. πππ
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google β€οΈ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.