pjotrp Goto Github PK

arvados

an open source platform for managing and analyzing biomedical big data

ascilib

A science library - SWIG mappings

auspice

Web app for visualizing pathogen evolution

bcbb

Incubator for useful bioinformatics code, primarily in Python and R

bh20-seq-resource

Tool to upload SARS-CoV-2 sequences and service to kick off analysis

bh20-simple-web-uploader

Web uploader for https://github.com/arvados/bh20-seq-resource ; demo: http://courtyard.gi.ucsc.edu:8088/

bh23

bhxiv-gen-pdf

Generate a PDF for BioHackrXiv.org

bigbio

Big data bioinformatics repository

bio---numcalc

Trial repository for numcalc

bio-locus

Bio-locus

bio-nexml

BioRuby plugin to read and write NeXML data

bioconda-recipes

Conda recipes for the bioconda channel.

biod

Development moved to https://git.thebird.nl/pjotrp/biod

biogems.info

Tools for keeping track of biogems. Moved to https://git.thebird.nl/free/biogems.info

bioinformatics

Tools for bioinformatics moved to http://git.genenetwork.org/pjotrp/bioinformatics

biolib

BioLib brings together a set of opensource libraries written in C/C++ and makes them available for all Bio* languages

biolib_hpc

High performance computing for Big Data

biolib_staden_io_lib

Biolib: Git copy of the SVN repository hosted as sourceforge

bionix

Bio packages for the Nix package system

bionode

BioNode Debian based VM tools

biopp

A reference repository of the Bio++ project (no history)

bioruby

Central testing repository for the Bioruby project

bioruby-affy

TODO: one-line summary of your gem

bioruby-alignment

TODO: one-line summary of your gem

bioruby-bioinformatics-impact

Calculate impact for researchers in bioinformatics

bioruby-core-plugin

Bioruby core plugin - adds/replaces core functionality

bioruby-exominer

Mining publications for gene names

bioruby-foo

TODO: one-line summary of your gem

bioruby-gem

BioGem helps Bioinformaticians start developing plugins/modules for BioRuby creating a scaffold and a gem package