Selection of the interaction sites and pLDTT score about umol HOT 4 CLOSED

Hi Cesar,

I think your reasoning is correct. Note that we have added a pocket-free version of Umol that you can try also. The pocket version should be better though.

Hope this helps!

Patrick

from umol.

Hi, Thanks for your answer. What would be different with pocket-free, Does it sample the whole protein?

from umol.

Yes, see https://github.com/patrickbryant1/Umol/blob/master/predict.sh.
I would still define the target site and use the pocket version though - just a tip.

from umol.

Thanks for your reply. I close this tread now.

Best wishes,

Cesar

from umol.