oskarvid Goto Github PK

accu-chek-mobile

Snakemake pipeline for graph generation of blood glucose measurements over time

adafruit-pi-externalroot-helper

A shell script to configure a USB drive as root filesystem.

album-splitter

Split a single-file mp3 album into its tracks. Supports downloading from YouTube.

ansible-pxe-setup

Simple playbook to setup a PXE boot server

awesome-bioinformatics

A curated list of awesome Bioinformatics libraries and software.

bash-templates

These scripts are frameworks for useful functions and standardized scripts that I often use

bashmenot

Library of GNU bash functions

coinsimulator

Simulates buying crypto-currencies over time.

coinx

Buy, sell, and find the best prices for crypto-currencies from multiple markets.

container-hands-on

databases-on-saga

Setup databases centrally

dock-ible

Tool for rapid development of ansible playbooks using docker containers as build environment

ehos

Elastic HTCondor OpenStack Scaling

entropicranksdocker

fasta-downsampler

Make smaller fasta files and generate indexes, a bed file and a dict file

grsworkflow

Repository for development of workflow for use case 1.1

gvanno

Generic germline variant annotation pipeline

happy-snake

Run hap.py with snakemake

imputationserver-docker

Docker Image for Michigan Imputation Server

kordia_pathway_analysis

Repository for all files and updates relevant to the Kordia sp. pathway analysis project

miniserve

:star2: For when you really just want to serve some files over HTTP right now!

mpv-ansible

Compile and configure mpv with ansible

mreg

multi-ble

A Multipass and Ansible tool for rapid iterations

nextflow-germlinevarcall

Location for a NextFlow implementation of a GATK best practices pipeline

raspbian-ua-netinst

Raspbian (minimal) unattended netinstaller

rbflow

Files related to the rbFlow germline variantcalling pipeline

rtl8188eu

Repository for stand-alone RTL8188EU driver.

saka

Simple Ansible Key Adder

selma

Germline Variant Calling Pipeline built in Snakemake